# Tools

Import Pycallingcards as:

```
import pycallingcards as cc
```

```{eval-rst}
.. currentmodule:: pycallingcards

```

```{eval-rst}
.. autosummary::
   :toctree: reference/
   :nosignatures:

   tools.call_motif
   tools.compare_motif
   tools.rank_peak_groups
   tools.rank_peak_groups_mu
   tools.rank_peak_groups_df
   tools.diff2group_bygroup
   tools.diff2group_bysample
   tools.DE_pvalue
   tools.pair_peak_gene_bulk
   tools.pair_peak_gene_sc
   tools.pair_peak_gene_sc_mu
   tools.liftover
   tools.find_location
   tools.result_mapping
   tools.GWAS
   tools.GWAS_adata_bulk
   tools.GWAS_adata_sc
   tools.footprint
   tools.find_fastq



```