References

[1]

10x Genomics. Visium hd cytassist gene expression libraries of mouse brain he. https://www.10xgenomics.com/datasets/visium-hd-cytassist-gene-expression-libraries-of-mouse-brain-he, 2024. Accessed: 2025-01-01.

[2]

10x Genomics. Visium hd cytassist gene expression libraries of mouse intestine. https://www.10xgenomics.com/datasets/visium-hd-cytassist-gene-expression-libraries-of-mouse-intestine, 2024. Accessed: 2025-01-01.

[3]

Isaac Virshup, Sergei Rybakov, Fabian J Theis, Philipp Angerer, and F Alexander Wolf. Anndata: annotated data. bioRxiv, 2021.

[4]

Martin Weigert and Uwe Schmidt. Nuclei instance segmentation and classification in histopathology images with stardist. In The IEEE International Symposium on Biomedical Imaging Challenges (ISBIC). 2022. doi:10.1109/ISBIC56247.2022.9854534.

[5]

F Alexander Wolf, Philipp Angerer, and Fabian J Theis. Scanpy: large-scale single-cell gene expression data analysis. Genome biology, 19(1):1–5, 2018.