pycallingcards.reading.read_barbodes#

pycallingcards.reading.read_barbodes(filename)[source]#

Read ‘barcodes.csv’ (single-cell calling cards) file.

Parameters:: filename (str) – Path to the barcode file.
Returns:: pd.DataFrame for the barcodes file.
Return type:: DataFrame
Example:

>>> import pycallingcards as cc
>>> qbed = cc.rd.read_barbodes("https://github.com/The-Mitra-Lab/pycallingcards_data/releases/download/data/Mouse-Cortex-scCC_barcodes.csv")