pycallingcards.reading.save_bed#
- pycallingcards.reading.save_bed(file, path)[source]#
Save .bed file.
>>> import pycallingcards as cc >>> SP1 = cc.rd.read_qbed("https://github.com/The-Mitra-Lab/pycallingcards_data/releases/download/data/SP1_P10.txt") >>> bed = cc.pp.callpeaks(SP1, method = "CCcaller", reference = "mm10") >>> qbed = cc.rd.save_bed(bed,"SP1.bed")